| TF name | Position | PWM scan score |
| MarA | 222-242 | 11.447 |
| IdnR | 123-138 | 10.377 |
| H-NS | 366-380 | 9.842 |
| Nac | 381-395 | 9.799 |
| PhoP | 373-389 | 9.519 |
| TorR | 93-102 | 9.298 |
| RcsB | 383-396 | 9.155 |
| Lrp | 202-213 | 8.931 |
| IHF | 235-247 | 8.890 |
| AraC | 128-145 | 8.838 |
| CueR | 320-338 | 8.773 |
| GcvA | 348-376 | 8.037 |
| Fur | 380-394 | 7.955 |
| GalS | 331-346 | 7.887 |
| GalR | 331-346 | 7.887 |
| OmpR | 375-394 | 7.787 |
| DeoR | 193-208 | 7.659 |
| DnaA | 168-176 | 7.512 |
| Fis | 197-217 | 7.172 |
| NarL | 382-388 | 6.718 |
| NtrC | 108-124 | 6.640 |
| GntR | 161-180 | 6.425 |
| CRP | 205-226 | 6.249 |
| MalT | 145-154 | 6.208 |
| FNR | 353-374 | 6.181 |
| GlpR | 348-367 | 6.032 |
| PspF | 377-393 | 5.975 |
| SoxS | 193-210 | 5.889 |
| FadR | 275-291 | 5.590 |
| Rob | 375-395 | 5.536 |
| Ada | 115-142 | 5.435 |
| ModE | 368-394 | 5.425 |
| NorR | 232-248 | 5.312 |
| NarP | 293-299 | 5.098 |