| TF name | Position | PWM scan score |
| Mlc | 244-266 | 16.041 |
| GlpR | 92-111 | 11.236 |
| NagC | 246-268 | 10.936 |
| CRP | 220-241 | 10.182 |
| RcsB | 373-386 | 9.395 |
| IHF | 261-273 | 9.308 |
| MetJ | 216-223 | 8.962 |
| UlaR | 167-186 | 8.669 |
| GadE | 179-198 | 8.573 |
| CytR | 178-217 | 8.433 |
| Nac | 225-239 | 8.417 |
| ArcA | 216-276 | 8.274 |
| TorR | 80-89 | 7.901 |
| H-NS | 314-328 | 7.900 |
| IdnR | 219-234 | 7.888 |
| DeoR | 162-177 | 7.755 |
| SoxS | 276-293 | 7.597 |
| OmpR | 333-352 | 7.349 |
| NarP | 251-257 | 7.127 |
| FNR | 265-286 | 7.123 |
| AgaR | 215-238 | 7.054 |
| DnaA | 94-102 | 6.730 |
| XylR | 65-82 | 6.724 |
| PhoB | 323-342 | 6.714 |
| Lrp | 21-32 | 6.702 |
| NarL | 298-304 | 6.560 |
| Ada | 160-187 | 6.213 |
| PhoP | 301-317 | 6.095 |
| PspF | 324-340 | 6.094 |
| MetR | 250-273 | 6.032 |
| FadR | 259-275 | 5.821 |
| ArgP | 339-351 | 5.659 |
| Fis | 270-290 | 5.536 |
| CpxR | 239-253 | 5.374 |
| TyrR | 171-192 | 5.306 |
| DcuR | 43-97 | 5.050 |
| AraC | 189-206 | 5.039 |