| TF name | Position | PWM scan score |
| GalR | 306-321 | 11.049 |
| GalS | 306-321 | 11.049 |
| IHF | 190-202 | 10.197 |
| OxyR | 188-232 | 8.891 |
| GlpR | 231-250 | 8.772 |
| ArgR | 298-313 | 8.264 |
| MalT | 210-219 | 8.196 |
| NarP | 272-278 | 8.188 |
| MetJ | 344-351 | 7.907 |
| H-NS | 291-305 | 7.868 |
| AraC | 296-313 | 7.551 |
| DnaA | 222-230 | 7.502 |
| PhoB | 96-115 | 7.366 |
| ArgP | 222-234 | 7.124 |
| Fis | 332-352 | 7.058 |
| SoxS | 329-346 | 6.882 |
| Lrp | 217-228 | 6.867 |
| GcvA | 24-52 | 6.371 |
| OmpR | 182-201 | 6.271 |
| TorR | 378-387 | 6.221 |
| CpxR | 358-372 | 6.199 |
| CRP | 354-375 | 6.167 |
| NarL | 58-64 | 5.541 |
| PspF | 227-243 | 5.482 |
| FNR | 286-307 | 5.465 |
| DeoR | 126-141 | 5.276 |
| TyrR | 188-209 | 5.208 |
| LexA | 373-392 | 5.184 |