| TF name | Position | PWM scan score |
| Rob | 179-199 | 12.363 |
| IHF | 38-50 | 11.898 |
| TorR | 46-55 | 11.455 |
| ArcA | 138-198 | 11.317 |
| PhoP | 158-174 | 11.280 |
| CRP | 114-135 | 11.190 |
| MetJ | 244-251 | 11.073 |
| MarA | 172-192 | 10.981 |
| GntR | 179-198 | 10.586 |
| ModE | 235-261 | 10.529 |
| OmpR | 159-178 | 10.385 |
| CysB | 140-181 | 9.811 |
| AgaR | 40-63 | 9.700 |
| CpxR | 148-162 | 9.589 |
| AraC | 154-171 | 9.247 |
| Lrp | 150-161 | 9.032 |
| IdnR | 146-161 | 8.950 |
| UlaR | 352-371 | 8.729 |
| GlpR | 234-253 | 8.309 |
| ArgR | 269-284 | 7.932 |
| FNR | 139-160 | 7.907 |
| NarP | 299-305 | 7.860 |
| PhoB | 163-182 | 7.719 |
| H-NS | 80-94 | 7.539 |
| NorR | 155-171 | 7.323 |
| NarL | 368-374 | 7.309 |
| GadE | 141-160 | 7.291 |
| DnaA | 116-124 | 7.116 |
| Fis | 104-124 | 7.008 |
| TrpR | 297-314 | 6.812 |
| ArgP | 116-128 | 6.589 |
| DeoR | 107-122 | 6.243 |
| NagC | 101-123 | 6.068 |
| Nac | 146-160 | 5.865 |
| RcsB | 270-283 | 5.817 |
| PspF | 380-396 | 5.718 |
| GcvA | 145-173 | 5.582 |
| UxuR | 121-138 | 5.551 |