| TF name | Position | PWM scan score |
| CysB | 234-275 | 14.615 |
| ArgR | 128-143 | 11.755 |
| ArgP | 60-72 | 10.429 |
| PhoP | 106-122 | 10.191 |
| Fur | 56-70 | 9.577 |
| GadE | 193-212 | 9.352 |
| H-NS | 125-139 | 9.348 |
| IdnR | 226-241 | 9.182 |
| FNR | 116-137 | 8.702 |
| ModE | 99-125 | 8.687 |
| PhoB | 372-391 | 8.022 |
| GlpR | 174-193 | 7.981 |
| OmpR | 97-116 | 7.807 |
| IHF | 169-181 | 7.452 |
| NarP | 75-81 | 7.377 |
| NagC | 94-116 | 7.330 |
| MarA | 325-345 | 7.280 |
| ArcA | 89-149 | 7.183 |
| NarL | 247-253 | 7.147 |
| Fis | 122-142 | 6.976 |
| MetR | 117-140 | 6.812 |
| UlaR | 122-141 | 6.528 |
| Lrp | 296-307 | 6.451 |
| DnaA | 152-160 | 6.403 |
| NorR | 241-257 | 6.199 |
| Nac | 60-74 | 6.016 |
| PspF | 233-249 | 5.975 |
| RcsB | 335-348 | 5.698 |
| GcvA | 108-136 | 5.582 |
| CRP | 163-184 | 5.433 |
| SoxS | 50-67 | 5.379 |