| TF name | Position | PWM scan score |
| NagC | 133-155 | 10.360 |
| MetJ | 221-228 | 8.530 |
| GalS | 141-156 | 7.883 |
| GalR | 141-156 | 7.883 |
| IHF | 124-136 | 7.654 |
| MalT | 259-268 | 7.567 |
| FadR | 145-161 | 7.538 |
| PhoP | 143-159 | 7.210 |
| Lrp | 373-384 | 7.034 |
| ModE | 262-288 | 7.006 |
| CueR | 159-177 | 6.928 |
| NarL | 41-47 | 6.918 |
| PurR | 141-156 | 6.869 |
| Nac | 56-70 | 6.585 |
| FNR | 259-280 | 6.458 |
| TorR | 57-66 | 5.851 |
| GlpR | 375-394 | 5.829 |
| CRP | 46-67 | 5.806 |
| ArgR | 1-16 | 5.745 |
| MetR | 365-388 | 5.470 |
| Rob | 308-328 | 5.460 |
| GadE | 136-155 | 5.395 |
| PhoB | 66-85 | 5.289 |
| OmpR | 129-148 | 5.270 |
| OxyR | 344-388 | 5.218 |
| Fis | 238-258 | 5.180 |
| MelR | 221-238 | 5.125 |
| XylR | 4-21 | 5.092 |