| TF name | Position | PWM scan score |
| MalT | 121-130 | 11.985 |
| CRP | 36-57 | 11.359 |
| GlpR | 38-57 | 10.131 |
| Rob | 89-109 | 9.843 |
| NagC | 262-284 | 9.814 |
| SoxS | 236-253 | 9.649 |
| H-NS | 275-289 | 9.545 |
| Nac | 4-18 | 9.083 |
| PurR | 220-235 | 9.076 |
| GcvA | 66-94 | 8.664 |
| CpxR | 230-244 | 7.863 |
| PhoB | 243-262 | 7.840 |
| NarL | 325-331 | 7.740 |
| IHF | 250-262 | 7.516 |
| DeoR | 231-246 | 7.478 |
| TorR | 33-42 | 7.359 |
| NarP | 18-24 | 7.302 |
| UlaR | 74-93 | 7.284 |
| NtrC | 177-193 | 7.207 |
| Fur | 12-26 | 7.004 |
| ArgR | 326-341 | 6.930 |
| OxyR | 207-251 | 6.728 |
| Lrp | 342-353 | 6.616 |
| GalS | 231-246 | 6.412 |
| GalR | 231-246 | 6.412 |
| NorR | 7-23 | 6.334 |
| FadR | 274-290 | 6.314 |
| MetJ | 2-9 | 6.216 |
| XylR | 232-249 | 6.167 |
| RcsB | 279-292 | 5.935 |
| MarA | 171-191 | 5.882 |
| UxuR | 339-356 | 5.862 |
| AraC | 344-361 | 5.808 |
| PspF | 224-240 | 5.797 |
| ArgP | 181-193 | 5.783 |
| OmpR | 234-253 | 5.604 |
| GadE | 304-323 | 5.453 |
| PhoP | 229-245 | 5.203 |