| TF name | Position | PWM scan score |
| AgaR | 150-173 | 15.083 |
| Mlc | 131-153 | 13.333 |
| GcvA | 122-150 | 12.279 |
| Nac | 23-37 | 12.210 |
| MelR | 313-330 | 10.084 |
| Ada | 313-340 | 9.708 |
| Fis | 345-365 | 9.587 |
| MalT | 183-192 | 9.294 |
| UlaR | 314-333 | 8.894 |
| CpxR | 335-349 | 8.686 |
| NagC | 133-155 | 8.400 |
| IHF | 325-337 | 8.389 |
| GntR | 272-291 | 8.003 |
| ModE | 305-331 | 7.860 |
| CytR | 85-124 | 7.751 |
| AraC | 141-158 | 7.549 |
| GlpR | 286-305 | 7.470 |
| UxuR | 227-244 | 7.247 |
| DnaA | 29-37 | 7.116 |
| FadR | 285-301 | 7.095 |
| Lrp | 330-341 | 7.068 |
| NarL | 26-32 | 6.881 |
| PspF | 302-318 | 6.881 |
| RcsB | 274-287 | 6.593 |
| ArgP | 26-38 | 6.589 |
| NarP | 259-265 | 6.524 |
| PhoP | 312-328 | 6.382 |
| GadE | 102-121 | 6.338 |
| NorR | 221-237 | 6.322 |
| MetR | 327-350 | 6.089 |
| PurR | 232-247 | 5.970 |
| FNR | 316-337 | 5.871 |
| Fur | 24-38 | 5.779 |
| H-NS | 109-123 | 5.772 |
| XylR | 324-341 | 5.734 |
| CRP | 75-96 | 5.722 |
| TyrR | 323-344 | 5.643 |
| ArcA | 291-351 | 5.367 |
| PhoB | 153-172 | 5.352 |
| CysB | 326-367 | 5.311 |
| Rob | 313-333 | 5.078 |