| TF name | Position | PWM scan score |
| H-NS | 325-339 | 9.549 |
| XylR | 53-70 | 8.690 |
| FhlA | 225-264 | 8.511 |
| RhaS | 63-79 | 8.231 |
| AraC | 30-47 | 7.562 |
| Fis | 317-337 | 7.365 |
| MalT | 142-151 | 7.093 |
| UxuR | 200-217 | 6.407 |
| DnaA | 49-57 | 6.340 |
| CueR | 270-288 | 6.223 |
| MetJ | 182-189 | 5.973 |
| TorR | 203-212 | 5.587 |
| Nac | 39-53 | 5.577 |
| Lrp | 206-217 | 5.205 |
| GlpR | 306-325 | 5.154 |
| NarP | 105-111 | 5.073 |