| TF name | Position | PWM scan score |
| FruR | 207-224 | 12.806 |
| LexA | 350-369 | 9.552 |
| NorR | 348-364 | 9.106 |
| GlpR | 123-142 | 9.046 |
| Nac | 351-365 | 8.829 |
| FadR | 90-106 | 8.742 |
| IHF | 247-259 | 8.730 |
| CRP | 256-277 | 8.723 |
| Rob | 158-178 | 8.090 |
| H-NS | 349-363 | 7.718 |
| FNR | 4-25 | 7.142 |
| DnaA | 187-195 | 7.095 |
| ArcA | 307-367 | 6.930 |
| NarL | 252-258 | 6.678 |
| NarP | 349-355 | 6.629 |
| TorR | 45-54 | 6.358 |
| MalT | 290-299 | 6.286 |
| SoxS | 190-207 | 6.199 |
| GntR | 365-384 | 5.713 |
| MarA | 17-37 | 5.657 |
| FhlA | 261-300 | 5.232 |