| TF name | Position | PWM scan score |
| MalT | 7-16 | 9.026 |
| MetJ | 362-369 | 8.962 |
| GalR | 185-200 | 8.776 |
| GalS | 185-200 | 8.776 |
| AraC | 257-274 | 8.459 |
| Rob | 277-297 | 7.728 |
| NtrC | 145-161 | 7.697 |
| MelR | 52-69 | 7.451 |
| RcsB | 52-65 | 7.413 |
| CRP | 256-277 | 7.372 |
| Fis | 246-266 | 7.216 |
| ModE | 234-260 | 6.450 |
| UlaR | 259-278 | 6.363 |
| Nac | 75-89 | 6.284 |
| MarA | 88-108 | 6.256 |
| NarL | 299-305 | 6.131 |
| CpxR | 275-289 | 6.122 |
| FNR | 269-290 | 5.957 |
| Lrp | 315-326 | 5.874 |
| NarP | 247-253 | 5.627 |
| FhlA | 170-209 | 5.487 |
| FadR | 118-134 | 5.418 |
| DeoR | 116-131 | 5.104 |
| RhaS | 143-159 | 5.100 |