| TF name | Position | PWM scan score |
| NagC | 267-289 | 10.875 |
| MarA | 49-69 | 10.323 |
| OmpR | 374-393 | 9.709 |
| CRP | 268-289 | 9.538 |
| RcsB | 18-31 | 9.305 |
| MetJ | 183-190 | 7.945 |
| GalR | 93-108 | 7.848 |
| GalS | 93-108 | 7.848 |
| Fis | 98-118 | 7.702 |
| PhoP | 379-395 | 7.625 |
| UlaR | 196-215 | 7.579 |
| NarL | 49-55 | 7.577 |
| IdnR | 375-390 | 7.355 |
| H-NS | 63-77 | 7.250 |
| NorR | 294-310 | 7.095 |
| Ada | 312-339 | 6.994 |
| IHF | 298-310 | 6.931 |
| RhaS | 119-135 | 6.855 |
| Lrp | 265-276 | 6.694 |
| CpxR | 183-197 | 6.594 |
| MalT | 334-343 | 6.418 |
| FNR | 271-292 | 6.282 |
| AraC | 257-274 | 6.064 |
| SoxS | 51-68 | 5.719 |
| TorR | 366-375 | 5.538 |
| Nac | 191-205 | 5.534 |
| GcvA | 258-286 | 5.489 |
| CysB | 329-370 | 5.456 |
| XylR | 371-388 | 5.250 |