| TF name | Position | PWM scan score |
| AraC | 237-254 | 14.398 |
| SoxS | 11-28 | 12.172 |
| TorR | 132-141 | 10.806 |
| Nac | 157-171 | 9.696 |
| NorR | 104-120 | 9.445 |
| RcsB | 291-304 | 9.433 |
| GcvA | 155-183 | 9.328 |
| XylR | 34-51 | 8.961 |
| MarA | 9-29 | 8.886 |
| CytR | 64-103 | 8.665 |
| PspF | 98-114 | 8.609 |
| NarL | 381-387 | 8.190 |
| Fis | 91-111 | 7.877 |
| ModE | 25-51 | 7.190 |
| Lrp | 31-42 | 7.012 |
| Rob | 156-176 | 6.980 |
| ArgP | 73-85 | 6.962 |
| CRP | 25-46 | 6.780 |
| H-NS | 347-361 | 6.764 |
| IHF | 355-367 | 6.748 |
| GntR | 156-175 | 6.643 |
| NarP | 153-159 | 6.629 |
| RhaS | 111-127 | 6.454 |
| MelR | 86-103 | 6.441 |
| Ada | 156-183 | 6.308 |
| GadE | 348-367 | 6.260 |
| NtrC | 105-121 | 6.215 |
| FruR | 222-239 | 6.187 |
| CpxR | 37-51 | 5.839 |
| MalT | 144-153 | 5.821 |
| FNR | 38-59 | 5.726 |
| GlpR | 35-54 | 5.678 |
| PhoP | 345-361 | 5.480 |
| FadR | 280-296 | 5.357 |
| IdnR | 323-338 | 5.344 |