| TF name | Position | PWM scan score |
| MetJ | 185-192 | 11.198 |
| AraC | 381-398 | 10.854 |
| PhoB | 151-170 | 10.643 |
| Nac | 379-393 | 8.175 |
| RhaS | 287-303 | 7.993 |
| IdnR | 160-175 | 7.710 |
| NarP | 273-279 | 7.659 |
| RcsB | 356-369 | 7.649 |
| LacI | 321-341 | 6.711 |
| MarA | 153-173 | 6.482 |
| Fis | 62-82 | 6.397 |
| TorR | 374-383 | 6.358 |
| NarL | 156-162 | 6.267 |
| DnaA | 271-279 | 6.246 |
| MalT | 339-348 | 6.131 |
| CpxR | 12-26 | 5.569 |
| Lrp | 383-394 | 5.233 |
| ModE | 348-374 | 5.217 |
| TrpR | 271-288 | 5.041 |