| TF name | Position | PWM scan score |
| OmpR | 380-399 | 14.985 |
| H-NS | 379-393 | 10.177 |
| PhoB | 380-399 | 9.990 |
| UxuR | 381-398 | 9.787 |
| NtrC | 285-301 | 9.339 |
| CueR | 166-184 | 8.682 |
| IHF | 188-200 | 8.482 |
| Nac | 109-123 | 8.286 |
| GlpR | 207-226 | 8.091 |
| GalR | 69-84 | 7.760 |
| GalS | 69-84 | 7.760 |
| FhlA | 281-320 | 7.650 |
| DeoR | 211-226 | 7.614 |
| NagC | 359-381 | 7.578 |
| Lrp | 382-393 | 7.481 |
| Fur | 374-388 | 6.816 |
| FadR | 87-103 | 6.707 |
| MetR | 370-393 | 6.466 |
| RcsB | 356-369 | 6.061 |
| SoxS | 19-36 | 5.991 |
| GadE | 19-38 | 5.859 |
| Rob | 42-62 | 5.853 |
| NarL | 363-369 | 5.837 |
| MarA | 374-394 | 5.805 |
| UlaR | 53-72 | 5.507 |
| CRP | 373-394 | 5.424 |
| CytR | 207-246 | 5.361 |
| ArgR | 61-76 | 5.045 |
| AraC | 69-86 | 5.010 |