| TF name | Position | PWM scan score |
| FadR | 357-373 | 10.746 |
| MalT | 212-221 | 9.161 |
| Lrp | 135-146 | 8.165 |
| MelR | 66-83 | 8.140 |
| PurR | 157-172 | 8.041 |
| TrpR | 283-300 | 7.862 |
| RhaS | 178-194 | 6.786 |
| DeoR | 365-380 | 6.617 |
| RcsB | 105-118 | 6.339 |
| IHF | 129-141 | 6.197 |
| AraC | 129-146 | 5.949 |
| NagC | 110-132 | 5.646 |
| MetJ | 39-46 | 5.618 |
| PhoB | 121-140 | 5.333 |
| LacI | 318-338 | 5.312 |
| NarL | 132-138 | 5.210 |