| TF name | Position | PWM scan score |
| UlaR | 256-275 | 15.253 |
| AgaR | 263-286 | 11.913 |
| AraC | 181-198 | 9.705 |
| NarP | 198-204 | 8.982 |
| Lrp | 137-148 | 8.485 |
| NagC | 141-163 | 8.336 |
| DeoR | 55-70 | 8.005 |
| Nac | 263-277 | 7.956 |
| ArgR | 78-93 | 7.946 |
| GntR | 339-358 | 7.873 |
| FadR | 83-99 | 7.868 |
| NtrC | 360-376 | 7.581 |
| TyrR | 93-114 | 7.514 |
| Fis | 27-47 | 7.330 |
| ArgP | 179-191 | 7.031 |
| CRP | 341-362 | 6.985 |
| PhoB | 250-269 | 6.601 |
| MarA | 56-76 | 6.544 |
| IHF | 187-199 | 6.388 |
| H-NS | 82-96 | 6.135 |
| TorR | 134-143 | 6.115 |
| UxuR | 118-135 | 5.972 |
| MalT | 226-235 | 5.493 |
| SoxS | 192-209 | 5.455 |
| NarL | 182-188 | 5.366 |
| RcsB | 137-150 | 5.259 |
| MetR | 2-25 | 5.198 |
| Ada | 198-225 | 5.167 |