| TF name | Position | PWM scan score |
| H-NS | 117-131 | 12.931 |
| Mlc | 110-132 | 12.543 |
| CysB | 187-228 | 12.093 |
| GlpR | 254-273 | 11.514 |
| AgaR | 145-168 | 11.343 |
| ArcA | 198-258 | 11.324 |
| NagC | 112-134 | 11.299 |
| GcvA | 134-162 | 10.739 |
| NorR | 191-207 | 9.015 |
| Fis | 255-275 | 8.686 |
| OmpR | 218-237 | 8.182 |
| SoxS | 106-123 | 7.975 |
| PspF | 341-357 | 7.910 |
| UlaR | 148-167 | 7.897 |
| PhoB | 377-396 | 7.796 |
| MalT | 1-10 | 7.672 |
| MelR | 283-300 | 7.638 |
| MetR | 148-171 | 7.220 |
| CRP | 110-131 | 7.200 |
| ModE | 51-77 | 7.139 |
| Lrp | 59-70 | 7.062 |
| RcsB | 186-199 | 7.006 |
| NarL | 61-67 | 6.854 |
| IHF | 278-290 | 6.770 |
| MarA | 207-227 | 6.634 |
| Rob | 216-236 | 6.546 |
| ArgP | 369-381 | 6.511 |
| XylR | 67-84 | 6.497 |
| DeoR | 258-273 | 5.976 |
| Nac | 217-231 | 5.640 |
| TyrR | 52-73 | 5.557 |
| NtrC | 56-72 | 5.540 |
| FNR | 259-280 | 5.539 |
| AraC | 246-263 | 5.343 |
| IdnR | 150-165 | 5.249 |