| TF name | Position | PWM scan score |
| Mlc | 288-310 | 13.385 |
| XylR | 352-369 | 12.443 |
| FadR | 227-243 | 12.065 |
| UxuR | 79-96 | 10.750 |
| Rob | 72-92 | 10.636 |
| OmpR | 357-376 | 10.084 |
| MelR | 206-223 | 10.010 |
| PhoB | 322-341 | 9.999 |
| Fur | 350-364 | 9.746 |
| LacI | 22-42 | 9.283 |
| TorR | 7-16 | 9.206 |
| DnaA | 146-154 | 9.149 |
| NorR | 187-203 | 9.138 |
| Fis | 350-370 | 9.047 |
| GadE | 45-64 | 8.910 |
| TyrR | 279-300 | 8.675 |
| PhoP | 381-397 | 8.274 |
| ModE | 311-337 | 7.914 |
| SoxS | 97-114 | 7.849 |
| CpxR | 112-126 | 7.809 |
| UlaR | 348-367 | 7.744 |
| H-NS | 330-344 | 7.557 |
| DeoR | 291-306 | 7.114 |
| Lrp | 304-315 | 7.095 |
| IHF | 81-93 | 6.520 |
| ArgP | 147-159 | 6.517 |
| FNR | 93-114 | 6.387 |
| RcsB | 357-370 | 6.076 |
| MarA | 295-315 | 5.786 |
| Nac | 198-212 | 5.440 |
| CRP | 92-113 | 5.369 |
| ArcA | 262-322 | 5.254 |
| CysB | 107-148 | 5.079 |