| TF name | Position | PWM scan score |
| PspF | 219-235 | 11.993 |
| GcvA | 184-212 | 10.963 |
| NagC | 186-208 | 10.756 |
| Fur | 213-227 | 10.703 |
| ArcA | 165-225 | 10.552 |
| CytR | 50-89 | 9.841 |
| OmpR | 358-377 | 9.742 |
| IHF | 37-49 | 9.285 |
| Mlc | 184-206 | 9.219 |
| CysB | 306-347 | 9.124 |
| TyrR | 350-371 | 9.046 |
| GlpR | 164-183 | 8.912 |
| CpxR | 354-368 | 8.607 |
| Lrp | 371-382 | 8.594 |
| UxuR | 46-63 | 8.355 |
| H-NS | 120-134 | 8.102 |
| RcsB | 372-385 | 8.017 |
| ArgP | 358-370 | 7.961 |
| XylR | 294-311 | 7.938 |
| PhoP | 209-225 | 7.481 |
| MetR | 180-203 | 7.405 |
| MetJ | 231-238 | 7.363 |
| CRP | 204-225 | 7.319 |
| MalT | 253-262 | 6.938 |
| NorR | 31-47 | 6.822 |
| PurR | 168-183 | 6.743 |
| NarL | 221-227 | 6.718 |
| RhaS | 11-27 | 6.681 |
| AraC | 247-264 | 6.657 |
| NarP | 366-372 | 6.368 |
| ModE | 40-66 | 6.214 |
| Nac | 301-315 | 6.190 |
| Fis | 352-372 | 6.128 |
| FNR | 213-234 | 6.021 |
| GntR | 358-377 | 5.997 |
| DeoR | 326-341 | 5.961 |
| Rob | 29-49 | 5.843 |
| MelR | 190-207 | 5.681 |
| UlaR | 162-181 | 5.589 |
| NtrC | 119-135 | 5.585 |
| ArgR | 170-185 | 5.257 |