| TF name | Position | PWM scan score |
| Nac | 79-93 | 11.159 |
| TorR | 86-95 | 10.661 |
| Lrp | 38-49 | 9.226 |
| NarP | 98-104 | 8.982 |
| UxuR | 74-91 | 8.280 |
| CueR | 55-73 | 8.008 |
| Rob | 150-170 | 7.488 |
| H-NS | 335-349 | 7.381 |
| NarL | 190-196 | 6.945 |
| RhaS | 21-37 | 6.920 |
| FNR | 98-119 | 6.387 |
| AraC | 180-197 | 6.075 |
| MarA | 179-199 | 6.014 |
| MetJ | 174-181 | 5.910 |
| SoxS | 287-304 | 5.750 |
| GntR | 144-163 | 5.709 |
| IHF | 32-44 | 5.594 |
| CytR | 228-267 | 5.216 |
| DeoR | 323-338 | 5.151 |
| MelR | 240-257 | 5.145 |
| LacI | 157-177 | 5.048 |
| MalT | 356-365 | 5.027 |