| TF name | Position | PWM scan score |
| MetR | 67-90 | 11.182 |
| Rob | 374-394 | 9.331 |
| ArgP | 374-386 | 8.804 |
| PspF | 323-339 | 8.621 |
| CueR | 8-26 | 8.153 |
| IHF | 382-394 | 7.925 |
| MalT | 38-47 | 7.470 |
| GntR | 207-226 | 7.417 |
| FNR | 195-216 | 7.273 |
| GadE | 331-350 | 7.131 |
| LacI | 354-374 | 7.016 |
| H-NS | 209-223 | 6.947 |
| XylR | 320-337 | 6.889 |
| ArgR | 216-231 | 6.665 |
| MetJ | 69-76 | 6.600 |
| TorR | 323-332 | 6.460 |
| DnaA | 212-220 | 6.355 |
| SoxS | 373-390 | 6.097 |
| ModE | 261-287 | 6.032 |
| OmpR | 322-341 | 5.753 |
| Fis | 286-306 | 5.389 |
| Nac | 302-316 | 5.224 |
| AraC | 298-315 | 5.212 |