| TF name | Position | PWM scan score |
| FNR | 12-33 | 10.401 |
| MetJ | 235-242 | 10.318 |
| RhaS | 43-59 | 9.079 |
| RcsB | 235-248 | 9.028 |
| AraC | 90-107 | 8.677 |
| IHF | 21-33 | 8.471 |
| UlaR | 309-328 | 7.880 |
| Nac | 233-247 | 7.825 |
| GlpR | 92-111 | 7.635 |
| MalT | 78-87 | 7.278 |
| CueR | 143-161 | 7.239 |
| PhoP | 245-261 | 6.913 |
| PhoB | 196-215 | 6.610 |
| MarA | 182-202 | 6.555 |
| LacI | 63-83 | 6.521 |
| NarL | 103-109 | 6.388 |
| TyrR | 92-113 | 6.278 |
| NorR | 322-338 | 6.108 |
| FadR | 6-22 | 6.106 |
| CRP | 237-258 | 6.004 |
| AgaR | 9-32 | 5.903 |
| Fis | 90-110 | 5.723 |
| TorR | 15-24 | 5.552 |
| SoxS | 184-201 | 5.353 |
| IdnR | 145-160 | 5.344 |