| TF name | Position | PWM scan score |
| Fis | 374-394 | 10.557 |
| AraC | 377-394 | 10.196 |
| CRP | 289-310 | 9.848 |
| UxuR | 297-314 | 8.753 |
| Rob | 301-321 | 7.781 |
| MarA | 372-392 | 7.289 |
| Ada | 223-250 | 7.048 |
| DnaA | 375-383 | 6.866 |
| IHF | 384-396 | 6.740 |
| Lrp | 382-393 | 6.677 |
| NarL | 284-290 | 6.294 |
| FNR | 292-313 | 6.082 |
| SoxS | 371-388 | 6.071 |
| H-NS | 371-385 | 6.011 |
| PhoB | 57-76 | 5.998 |
| AgaR | 228-251 | 5.978 |
| FadR | 383-399 | 5.492 |
| IdnR | 102-117 | 5.344 |
| CysB | 262-303 | 5.182 |
| ArgR | 242-257 | 5.168 |
| PspF | 234-250 | 5.007 |