| TF name | Position | PWM scan score |
| Nac | 180-194 | 11.639 |
| GlpR | 180-199 | 10.271 |
| PhoB | 249-268 | 9.939 |
| TorR | 379-388 | 9.372 |
| Mlc | 172-194 | 8.769 |
| FNR | 208-229 | 8.647 |
| ArcA | 63-123 | 8.103 |
| Rob | 333-353 | 8.080 |
| FadR | 65-81 | 7.910 |
| H-NS | 178-192 | 7.903 |
| NagC | 263-285 | 7.829 |
| AgaR | 306-329 | 7.735 |
| CpxR | 256-270 | 7.680 |
| UlaR | 249-268 | 7.531 |
| IHF | 191-203 | 7.446 |
| XylR | 82-99 | 7.335 |
| CytR | 316-355 | 7.254 |
| GadE | 262-281 | 7.168 |
| MelR | 363-380 | 6.769 |
| LacI | 120-140 | 6.732 |
| NarP | 37-43 | 6.703 |
| Lrp | 204-215 | 6.644 |
| ArgP | 226-238 | 6.517 |
| PurR | 302-317 | 6.334 |
| CRP | 76-97 | 6.273 |
| RcsB | 205-218 | 6.236 |
| DnaA | 174-182 | 6.219 |
| UxuR | 250-267 | 6.163 |
| MetJ | 224-231 | 5.910 |
| AraC | 372-389 | 5.874 |
| ArgR | 80-95 | 5.701 |
| NarL | 335-341 | 5.551 |
| OmpR | 180-199 | 5.467 |
| MetR | 296-319 | 5.309 |
| MalT | 354-363 | 5.277 |
| DeoR | 80-95 | 5.245 |
| Fis | 224-244 | 5.237 |