| TF name | Position | PWM scan score |
| CytR | 113-152 | 19.325 |
| UxuR | 136-153 | 14.509 |
| Mlc | 126-148 | 11.098 |
| Fis | 365-385 | 10.363 |
| IHF | 142-154 | 10.343 |
| PspF | 135-151 | 9.241 |
| MetR | 84-107 | 9.011 |
| TorR | 11-20 | 8.860 |
| GadE | 12-31 | 8.781 |
| H-NS | 83-97 | 8.218 |
| NagC | 214-236 | 8.211 |
| CRP | 136-157 | 8.117 |
| PhoB | 23-42 | 8.105 |
| Lrp | 370-381 | 7.792 |
| DeoR | 361-376 | 7.726 |
| OmpR | 133-152 | 7.712 |
| ModE | 136-162 | 7.644 |
| NarP | 254-260 | 7.232 |
| Nac | 239-253 | 7.219 |
| MetJ | 8-15 | 7.198 |
| IdnR | 86-101 | 7.177 |
| SoxS | 101-118 | 7.171 |
| GcvA | 208-236 | 7.164 |
| NarL | 234-240 | 6.944 |
| MarA | 360-380 | 6.907 |
| PurR | 110-125 | 6.650 |
| GlpR | 243-262 | 6.578 |
| ArgR | 140-155 | 6.533 |
| FruR | 185-202 | 6.484 |
| OxyR | 338-382 | 6.057 |
| CueR | 36-54 | 5.870 |
| GntR | 78-97 | 5.845 |
| RhaS | 157-173 | 5.492 |
| NorR | 378-394 | 5.482 |
| FadR | 20-36 | 5.468 |
| UlaR | 84-103 | 5.429 |
| Rob | 134-154 | 5.297 |
| FNR | 8-29 | 5.261 |
| DnaA | 138-146 | 5.061 |