| TF name | Position | PWM scan score |
| PurR | 4-19 | 13.479 |
| LacI | 297-317 | 11.124 |
| FadR | 323-339 | 10.853 |
| Nac | 339-353 | 10.494 |
| Rob | 378-398 | 9.222 |
| FNR | 97-118 | 9.184 |
| NarP | 125-131 | 8.982 |
| CRP | 367-388 | 8.170 |
| UlaR | 184-203 | 8.052 |
| FruR | 184-201 | 7.941 |
| ArgP | 352-364 | 7.495 |
| IHF | 356-368 | 7.371 |
| NagC | 340-362 | 7.360 |
| MetJ | 56-63 | 7.171 |
| GalR | 4-19 | 6.957 |
| GalS | 4-19 | 6.957 |
| IdnR | 15-30 | 6.941 |
| NarL | 259-265 | 6.428 |
| Fis | 200-220 | 6.380 |
| AraC | 230-247 | 6.252 |
| OmpR | 7-26 | 6.198 |
| H-NS | 375-389 | 6.090 |
| SoxS | 90-107 | 5.866 |
| ArgR | 203-218 | 5.376 |
| TorR | 31-40 | 5.335 |
| RcsB | 272-285 | 5.235 |
| DeoR | 160-175 | 5.185 |
| LexA | 98-117 | 5.105 |
| Lrp | 322-333 | 5.073 |
| MalT | 261-270 | 5.002 |