| TF name | Position | PWM scan score |
| IdnR | 16-31 | 12.131 |
| H-NS | 381-395 | 11.023 |
| AgaR | 153-176 | 10.824 |
| IHF | 382-394 | 10.429 |
| NtrC | 231-247 | 10.236 |
| DeoR | 72-87 | 9.321 |
| NarP | 344-350 | 8.982 |
| MetJ | 62-69 | 8.399 |
| AraC | 311-328 | 8.250 |
| FadR | 365-381 | 8.068 |
| SoxS | 326-343 | 8.057 |
| FNR | 373-394 | 7.447 |
| PhoB | 204-223 | 7.021 |
| Lrp | 208-219 | 6.711 |
| OmpR | 374-393 | 6.691 |
| MelR | 160-177 | 6.498 |
| Rob | 373-393 | 6.435 |
| Fur | 382-396 | 6.395 |
| Fis | 367-387 | 6.358 |
| NorR | 196-212 | 6.243 |
| FruR | 328-345 | 6.153 |
| CRP | 194-215 | 5.771 |
| MalT | 94-103 | 5.241 |
| GadE | 201-220 | 5.239 |
| CpxR | 370-384 | 5.108 |
| PspF | 364-380 | 5.032 |