| TF name | Position | PWM scan score |
| Rob | 191-211 | 12.385 |
| DeoR | 19-34 | 11.177 |
| AraC | 149-166 | 10.775 |
| NorR | 193-209 | 10.581 |
| MetJ | 239-246 | 10.479 |
| NtrC | 41-57 | 10.340 |
| MalT | 329-338 | 8.874 |
| Nac | 192-206 | 8.197 |
| RhaS | 212-228 | 8.162 |
| FNR | 194-215 | 8.008 |
| Lrp | 208-219 | 7.925 |
| CRP | 26-47 | 7.914 |
| MetR | 32-55 | 7.696 |
| AgaR | 192-215 | 7.642 |
| OmpR | 135-154 | 7.586 |
| GcvA | 201-229 | 7.439 |
| NarP | 260-266 | 7.232 |
| Fis | 37-57 | 7.132 |
| RcsB | 41-54 | 6.950 |
| IdnR | 230-245 | 6.941 |
| NarL | 347-353 | 6.388 |
| IHF | 199-211 | 6.386 |
| MarA | 92-112 | 6.276 |
| CueR | 270-288 | 5.945 |
| ArgR | 40-55 | 5.945 |
| DnaA | 141-149 | 5.939 |
| GntR | 375-394 | 5.694 |
| TorR | 142-151 | 5.632 |
| XylR | 351-368 | 5.616 |