| TF name | Position | PWM scan score |
| SoxS | 325-342 | 11.634 |
| NorR | 41-57 | 11.149 |
| ModE | 242-268 | 10.970 |
| H-NS | 337-351 | 9.391 |
| PhoP | 334-350 | 9.309 |
| MetJ | 271-278 | 8.626 |
| NarP | 284-290 | 8.154 |
| Lrp | 382-393 | 8.052 |
| GlpR | 339-358 | 7.993 |
| CRP | 208-229 | 7.956 |
| Nac | 47-61 | 7.087 |
| FNR | 271-292 | 7.039 |
| UxuR | 276-293 | 6.924 |
| NarL | 326-332 | 6.696 |
| AraC | 55-72 | 6.555 |
| PhoB | 213-232 | 6.435 |
| MalT | 233-242 | 6.226 |
| Rob | 79-99 | 6.182 |
| MetR | 328-351 | 6.083 |
| IHF | 289-301 | 5.915 |
| MelR | 214-231 | 5.659 |
| CytR | 24-63 | 5.590 |
| CpxR | 225-239 | 5.549 |
| AgaR | 281-304 | 5.435 |
| IdnR | 48-63 | 5.435 |
| PurR | 121-136 | 5.302 |
| Fis | 329-349 | 5.063 |
| GntR | 344-363 | 5.015 |