| TF name | Position | PWM scan score |
| TyrR | 296-317 | 11.309 |
| IHF | 268-280 | 10.988 |
| MetR | 169-192 | 10.829 |
| MalT | 101-110 | 10.768 |
| GalS | 242-257 | 10.377 |
| GalR | 242-257 | 10.377 |
| UxuR | 8-25 | 10.229 |
| CRP | 281-302 | 9.958 |
| NagC | 21-43 | 9.593 |
| DnaA | 294-302 | 9.275 |
| ArgP | 20-32 | 8.786 |
| ArcA | 184-244 | 8.771 |
| H-NS | 34-48 | 8.332 |
| NarP | 315-321 | 8.308 |
| AgaR | 172-195 | 8.062 |
| MarA | 67-87 | 7.928 |
| GcvA | 256-284 | 7.886 |
| RcsB | 212-225 | 7.775 |
| Nac | 100-114 | 7.676 |
| XylR | 258-275 | 7.643 |
| FadR | 352-368 | 7.385 |
| TorR | 291-300 | 7.293 |
| OxyR | 183-227 | 7.204 |
| CytR | 184-223 | 7.176 |
| MetJ | 148-155 | 7.138 |
| NarL | 46-52 | 6.944 |
| UlaR | 189-208 | 6.827 |
| FNR | 263-284 | 6.425 |
| Lrp | 70-81 | 6.340 |
| PhoB | 76-95 | 6.286 |
| OmpR | 261-280 | 6.222 |
| SoxS | 212-229 | 6.187 |
| AraC | 288-305 | 6.107 |
| IdnR | 203-218 | 6.089 |
| GadE | 36-55 | 6.010 |
| GlpR | 150-169 | 5.971 |
| PspF | 299-315 | 5.884 |
| ArgR | 32-47 | 5.814 |
| DeoR | 342-357 | 5.517 |
| Mlc | 258-280 | 5.394 |
| PhoP | 293-309 | 5.346 |
| RhaS | 241-257 | 5.046 |
| PurR | 47-62 | 5.043 |