| TF name | Position | PWM scan score |
| GlpR | 377-396 | 12.717 |
| IHF | 352-364 | 12.018 |
| GadE | 347-366 | 10.961 |
| Rob | 344-364 | 10.732 |
| MalT | 259-268 | 10.516 |
| GcvA | 342-370 | 9.881 |
| ModE | 302-328 | 8.723 |
| ArcA | 314-374 | 8.428 |
| NarP | 285-291 | 7.860 |
| UlaR | 232-251 | 7.748 |
| SoxS | 364-381 | 7.458 |
| UxuR | 247-264 | 7.440 |
| Lrp | 20-31 | 7.411 |
| MetJ | 242-249 | 7.240 |
| H-NS | 351-365 | 7.022 |
| NarL | 8-14 | 6.945 |
| FNR | 338-359 | 6.920 |
| LexA | 133-152 | 6.835 |
| PhoP | 371-387 | 6.634 |
| OmpR | 345-364 | 6.592 |
| MarA | 378-398 | 6.544 |
| OxyR | 335-379 | 6.510 |
| ArgP | 240-252 | 6.502 |
| NorR | 315-331 | 6.152 |
| CueR | 159-177 | 6.115 |
| Fis | 349-369 | 5.958 |
| PurR | 88-103 | 5.824 |
| DeoR | 162-177 | 5.160 |
| CRP | 340-361 | 5.149 |
| FadR | 130-146 | 5.112 |
| CytR | 211-250 | 5.032 |