| TF name | Position | PWM scan score |
| NagC | 293-315 | 10.137 |
| Rob | 244-264 | 9.556 |
| PurR | 330-345 | 9.506 |
| Mlc | 291-313 | 9.181 |
| FadR | 56-72 | 9.087 |
| ArcA | 291-351 | 8.922 |
| H-NS | 243-257 | 8.488 |
| CRP | 235-256 | 8.420 |
| Fur | 329-343 | 8.409 |
| PspF | 234-250 | 8.381 |
| MarA | 214-234 | 8.106 |
| GadE | 305-324 | 7.748 |
| Lrp | 197-208 | 7.649 |
| SoxS | 155-172 | 7.480 |
| MetR | 275-298 | 7.341 |
| UlaR | 280-299 | 7.269 |
| ArgP | 222-234 | 7.044 |
| Fis | 300-320 | 6.687 |
| AraC | 89-106 | 6.665 |
| XylR | 108-125 | 6.379 |
| FruR | 369-386 | 6.341 |
| GntR | 98-117 | 6.276 |
| AgaR | 228-251 | 6.242 |
| RhaS | 148-164 | 6.237 |
| FNR | 214-235 | 6.048 |
| MalT | 280-289 | 6.044 |
| PhoB | 308-327 | 5.644 |
| RcsB | 333-346 | 5.621 |
| NarP | 123-129 | 5.593 |
| OmpR | 303-322 | 5.498 |
| MelR | 298-315 | 5.495 |
| NarL | 309-315 | 5.205 |
| UxuR | 365-382 | 5.145 |
| CueR | 203-221 | 5.113 |