| TF name | Position | PWM scan score |
| GlpR | 341-360 | 12.706 |
| PhoB | 317-336 | 10.668 |
| SoxS | 112-129 | 10.183 |
| PurR | 67-82 | 10.003 |
| CueR | 268-286 | 9.514 |
| TorR | 224-233 | 9.238 |
| IHF | 221-233 | 8.986 |
| PhoP | 326-342 | 8.889 |
| FadR | 248-264 | 8.700 |
| RcsB | 339-352 | 8.394 |
| Fur | 215-229 | 8.300 |
| Rob | 350-370 | 7.819 |
| DeoR | 304-319 | 7.691 |
| OmpR | 343-362 | 7.546 |
| MarA | 110-130 | 7.349 |
| ArgP | 364-376 | 7.146 |
| Nac | 223-237 | 7.091 |
| CRP | 84-105 | 6.868 |
| TyrR | 209-230 | 6.864 |
| UlaR | 221-240 | 6.842 |
| Fis | 294-314 | 6.726 |
| GadE | 359-378 | 6.693 |
| Lrp | 138-149 | 6.631 |
| MetR | 206-229 | 6.429 |
| GalS | 367-382 | 6.215 |
| GalR | 367-382 | 6.215 |
| IdnR | 170-185 | 6.014 |
| NarL | 135-141 | 5.876 |
| MalT | 30-39 | 5.570 |
| ArgR | 245-260 | 5.444 |
| NorR | 65-81 | 5.358 |
| MetJ | 231-238 | 5.203 |
| H-NS | 102-116 | 5.193 |