| TF name | Position | PWM scan score |
| H-NS | 211-225 | 9.935 |
| Fur | 18-32 | 9.814 |
| NarL | 284-290 | 8.190 |
| GalS | 73-88 | 7.761 |
| GalR | 73-88 | 7.761 |
| CpxR | 22-36 | 6.983 |
| MetJ | 336-343 | 6.337 |
| Rob | 22-42 | 6.159 |
| Fis | 357-377 | 5.979 |
| SoxS | 11-28 | 5.930 |
| DeoR | 131-146 | 5.901 |
| Nac | 16-30 | 5.896 |
| PurR | 73-88 | 5.837 |
| FadR | 347-363 | 5.772 |
| CueR | 109-127 | 5.700 |
| Lrp | 21-32 | 5.629 |
| RhaS | 308-324 | 5.611 |
| MarA | 76-96 | 5.436 |
| RcsB | 24-37 | 5.357 |
| OmpR | 131-150 | 5.214 |
| GadE | 24-43 | 5.172 |