| TF name | Position | PWM scan score |
| NorR | 285-301 | 17.791 |
| Fis | 310-330 | 9.472 |
| DeoR | 376-391 | 9.010 |
| Rob | 139-159 | 8.940 |
| GadE | 250-269 | 8.886 |
| UxuR | 141-158 | 7.768 |
| RcsB | 292-305 | 7.424 |
| RhaS | 212-228 | 7.237 |
| TorR | 375-384 | 7.222 |
| H-NS | 339-353 | 6.961 |
| FadR | 119-135 | 6.791 |
| MalT | 45-54 | 6.656 |
| UlaR | 85-104 | 6.653 |
| XylR | 72-89 | 6.401 |
| MelR | 254-271 | 6.224 |
| DnaA | 343-351 | 6.168 |
| FNR | 345-366 | 5.965 |
| IHF | 324-336 | 5.792 |
| Lrp | 271-282 | 5.748 |
| MetJ | 345-352 | 5.599 |
| NagC | 5-27 | 5.559 |
| Nac | 261-275 | 5.473 |
| GlpR | 246-265 | 5.408 |
| TyrR | 54-75 | 5.313 |
| LacI | 213-233 | 5.279 |
| AraC | 292-309 | 5.218 |
| ArgP | 291-303 | 5.066 |