| TF name | Position | PWM scan score |
| RhaS | 148-164 | 9.909 |
| IHF | 345-357 | 9.767 |
| XylR | 302-319 | 8.933 |
| NorR | 144-160 | 8.889 |
| OmpR | 87-106 | 8.270 |
| Mlc | 192-214 | 8.176 |
| DnaA | 311-319 | 7.886 |
| FadR | 367-383 | 7.852 |
| Rob | 336-356 | 7.824 |
| Nac | 375-389 | 7.562 |
| H-NS | 165-179 | 7.330 |
| GadE | 377-396 | 7.116 |
| NarL | 4-10 | 6.945 |
| TorR | 239-248 | 6.822 |
| PhoB | 198-217 | 6.767 |
| GalS | 14-29 | 6.615 |
| GalR | 14-29 | 6.615 |
| MalT | 359-368 | 6.524 |
| ArgP | 312-324 | 6.513 |
| UxuR | 47-64 | 6.414 |
| PhoP | 314-330 | 6.285 |
| Lrp | 227-238 | 5.895 |
| CytR | 179-218 | 5.886 |
| MelR | 199-216 | 5.872 |
| SoxS | 74-91 | 5.871 |
| Fis | 310-330 | 5.843 |
| FNR | 310-331 | 5.481 |
| Ada | 218-245 | 5.443 |