| TF name | Position | PWM scan score |
| Fis | 73-93 | 13.013 |
| H-NS | 47-61 | 12.004 |
| SoxS | 304-321 | 11.090 |
| MetJ | 354-361 | 10.091 |
| NorR | 287-303 | 9.899 |
| NagC | 376-398 | 8.352 |
| AraC | 49-66 | 7.914 |
| Mlc | 267-289 | 7.755 |
| CRP | 377-398 | 7.748 |
| NarL | 229-235 | 7.713 |
| Lrp | 180-191 | 7.150 |
| GlpR | 293-312 | 7.136 |
| MalT | 108-117 | 6.779 |
| IHF | 165-177 | 6.692 |
| RcsB | 32-45 | 6.568 |
| DnaA | 295-303 | 6.527 |
| CysB | 283-324 | 6.340 |
| FNR | 374-395 | 6.138 |
| TorR | 75-84 | 6.137 |
| GntR | 375-394 | 6.017 |
| OmpR | 318-337 | 6.008 |
| GalR | 223-238 | 5.902 |
| GalS | 223-238 | 5.902 |
| ArgP | 79-91 | 5.900 |
| Nac | 47-61 | 5.675 |
| NtrC | 159-175 | 5.654 |
| MetR | 277-300 | 5.619 |
| PhoB | 311-330 | 5.435 |
| PurR | 68-83 | 5.303 |
| TyrR | 66-87 | 5.288 |
| DeoR | 137-152 | 5.280 |
| NarP | 93-99 | 5.084 |