| TF name | Position | PWM scan score |
| RcsB | 325-338 | 11.792 |
| Rob | 7-27 | 11.256 |
| Nac | 8-22 | 11.215 |
| MarA | 156-176 | 10.875 |
| MalT | 237-246 | 10.328 |
| XylR | 132-149 | 10.224 |
| FadR | 55-71 | 9.756 |
| Fur | 319-333 | 9.553 |
| NorR | 318-334 | 9.548 |
| IHF | 110-122 | 9.139 |
| SoxS | 122-139 | 8.683 |
| PhoB | 127-146 | 8.650 |
| DeoR | 36-51 | 8.567 |
| H-NS | 136-150 | 8.213 |
| Lrp | 243-254 | 8.016 |
| GlpR | 56-75 | 8.014 |
| NarL | 93-99 | 7.577 |
| ArcA | 307-367 | 7.506 |
| ArgP | 324-336 | 7.428 |
| LacI | 119-139 | 7.261 |
| GalS | 168-183 | 7.098 |
| GalR | 168-183 | 7.098 |
| NarP | 23-29 | 6.598 |
| OmpR | 80-99 | 6.165 |
| MelR | 274-291 | 5.840 |
| CysB | 130-171 | 5.802 |
| MetR | 109-132 | 5.503 |
| TorR | 9-18 | 5.337 |
| CueR | 148-166 | 5.192 |
| Mlc | 306-328 | 5.069 |