| TF name | Position | PWM scan score |
| ArcA | 122-182 | 12.446 |
| ModE | 322-348 | 11.709 |
| Nac | 80-94 | 11.202 |
| IdnR | 378-393 | 10.924 |
| OxyR | 350-394 | 10.636 |
| FNR | 140-161 | 10.217 |
| OmpR | 211-230 | 9.343 |
| H-NS | 214-228 | 8.296 |
| PspF | 1-17 | 8.167 |
| MetJ | 356-363 | 7.907 |
| NarL | 241-247 | 7.577 |
| DeoR | 208-223 | 7.544 |
| IHF | 13-25 | 7.459 |
| Lrp | 108-119 | 7.416 |
| Fis | 2-22 | 7.238 |
| PhoB | 49-68 | 6.975 |
| GcvA | 10-38 | 6.540 |
| ArgP | 269-281 | 6.511 |
| NorR | 179-195 | 6.152 |
| AraC | 120-137 | 6.028 |
| MelR | 62-79 | 5.790 |
| PhoP | 331-347 | 5.585 |
| ArgR | 329-344 | 5.550 |
| Fur | 82-96 | 5.253 |
| UxuR | 2-19 | 5.190 |
| Rob | 332-352 | 5.025 |
| TorR | 372-381 | 5.025 |