| TF name | Position | PWM scan score |
| MarA | 129-149 | 12.078 |
| XylR | 34-51 | 12.033 |
| Nac | 9-23 | 11.108 |
| Rob | 44-64 | 10.723 |
| SoxS | 131-148 | 10.710 |
| GlpR | 126-145 | 10.064 |
| FNR | 111-132 | 9.739 |
| IHF | 120-132 | 9.464 |
| ArcA | 99-159 | 9.169 |
| ArgP | 371-383 | 8.587 |
| H-NS | 40-54 | 8.395 |
| GadE | 145-164 | 8.381 |
| DeoR | 11-26 | 8.089 |
| ModE | 146-172 | 7.898 |
| Lrp | 208-219 | 7.879 |
| Fis | 33-53 | 7.466 |
| DnaA | 43-51 | 7.330 |
| Ada | 336-363 | 7.210 |
| NarP | 379-385 | 7.057 |
| MelR | 178-195 | 6.919 |
| LacI | 354-374 | 6.857 |
| GalS | 231-246 | 6.815 |
| GalR | 231-246 | 6.815 |
| CRP | 212-233 | 6.401 |
| PhoP | 374-390 | 6.294 |
| CueR | 96-114 | 6.044 |
| Fur | 54-68 | 5.965 |
| PhoB | 147-166 | 5.886 |
| TorR | 10-19 | 5.837 |
| RcsB | 112-125 | 5.576 |
| UlaR | 105-124 | 5.571 |
| NarL | 348-354 | 5.541 |
| MetR | 144-167 | 5.412 |
| IdnR | 360-375 | 5.356 |
| CysB | 116-157 | 5.270 |