| TF name | Position | PWM scan score |
| Rob | 49-69 | 11.988 |
| MetJ | 374-381 | 9.381 |
| MarA | 9-29 | 9.336 |
| MetR | 252-275 | 9.179 |
| AgaR | 179-202 | 8.511 |
| MalT | 244-253 | 8.415 |
| IHF | 46-58 | 8.267 |
| UlaR | 288-307 | 8.244 |
| MelR | 63-80 | 7.843 |
| IdnR | 217-232 | 7.797 |
| CueR | 84-102 | 7.620 |
| Lrp | 12-23 | 7.392 |
| RhaS | 356-372 | 7.288 |
| OmpR | 374-393 | 7.276 |
| H-NS | 384-398 | 6.878 |
| PhoB | 375-394 | 6.868 |
| NorR | 51-67 | 6.697 |
| FNR | 18-39 | 6.694 |
| ModE | 252-278 | 6.622 |
| NarL | 78-84 | 6.494 |
| SoxS | 11-28 | 5.935 |
| LacI | 350-370 | 5.623 |
| NarP | 321-327 | 5.581 |
| Mlc | 135-157 | 5.300 |
| FadR | 36-52 | 5.245 |
| DeoR | 3-18 | 5.211 |
| Fis | 253-273 | 5.157 |
| ArgR | 259-274 | 5.125 |