| TF name | Position | PWM scan score |
| IdnR | 144-159 | 13.694 |
| H-NS | 385-399 | 11.670 |
| SoxS | 123-140 | 10.749 |
| Fis | 162-182 | 10.436 |
| CRP | 151-172 | 8.985 |
| Lrp | 322-333 | 8.526 |
| DnaA | 156-164 | 8.498 |
| FruR | 91-108 | 8.428 |
| PhoP | 156-172 | 8.273 |
| RcsB | 320-333 | 7.926 |
| FadR | 134-150 | 7.750 |
| ArgR | 168-183 | 7.578 |
| NagC | 157-179 | 7.338 |
| NarP | 223-229 | 7.162 |
| TorR | 303-312 | 7.050 |
| MarA | 121-141 | 6.859 |
| Mlc | 155-177 | 6.842 |
| CysB | 83-124 | 6.834 |
| OmpR | 158-177 | 6.232 |
| UxuR | 273-290 | 6.009 |
| NarL | 309-315 | 5.823 |
| ArgP | 171-183 | 5.761 |
| GalS | 340-355 | 5.388 |
| GalR | 340-355 | 5.388 |
| XylR | 91-108 | 5.378 |
| GcvA | 368-396 | 5.302 |
| GadE | 310-329 | 5.285 |
| GntR | 363-382 | 5.266 |
| CpxR | 307-321 | 5.252 |
| Nac | 308-322 | 5.199 |
| GlpR | 370-389 | 5.113 |