| TF name | Position | PWM scan score |
| CytR | 45-84 | 11.031 |
| MetJ | 265-272 | 10.318 |
| GalS | 317-332 | 9.894 |
| GalR | 317-332 | 9.894 |
| CRP | 322-343 | 9.731 |
| FNR | 333-354 | 9.437 |
| H-NS | 189-203 | 9.206 |
| AraC | 265-282 | 8.412 |
| NarL | 238-244 | 8.326 |
| NarP | 370-376 | 8.308 |
| Lrp | 336-347 | 8.134 |
| GcvA | 185-213 | 8.119 |
| FhlA | 162-201 | 7.987 |
| OmpR | 5-24 | 7.581 |
| PhoP | 138-154 | 7.569 |
| NorR | 155-171 | 7.186 |
| UlaR | 49-68 | 7.074 |
| MelR | 337-354 | 6.944 |
| GadE | 379-398 | 6.793 |
| RcsB | 364-377 | 6.729 |
| PhoB | 179-198 | 6.689 |
| FadR | 41-57 | 6.611 |
| DnaA | 32-40 | 6.554 |
| CpxR | 188-202 | 6.474 |
| Rob | 66-86 | 6.432 |
| ArgP | 85-97 | 6.333 |
| NtrC | 354-370 | 6.232 |
| IHF | 228-240 | 6.208 |
| XylR | 296-313 | 6.117 |
| TyrR | 151-172 | 6.080 |
| MalT | 30-39 | 5.842 |
| TorR | 136-145 | 5.838 |
| MarA | 331-351 | 5.809 |
| ArgR | 332-347 | 5.773 |
| ModE | 7-33 | 5.004 |