| TF name | Position | PWM scan score |
| LexA | 233-252 | 14.734 |
| FNR | 258-279 | 13.866 |
| ArgR | 162-177 | 13.003 |
| Fis | 356-376 | 12.063 |
| LacI | 42-62 | 11.819 |
| PhoB | 155-174 | 11.280 |
| RhaS | 101-117 | 10.119 |
| AraC | 346-363 | 10.110 |
| H-NS | 157-171 | 9.893 |
| DnaA | 76-84 | 9.738 |
| OmpR | 352-371 | 9.344 |
| CRP | 255-276 | 9.337 |
| MetR | 72-95 | 9.232 |
| MetJ | 39-46 | 8.714 |
| GadE | 353-372 | 8.713 |
| IHF | 239-251 | 8.341 |
| MalT | 218-227 | 8.207 |
| Lrp | 71-82 | 8.139 |
| DeoR | 151-166 | 8.062 |
| NtrC | 360-376 | 8.061 |
| Ada | 26-53 | 7.668 |
| OxyR | 57-101 | 7.464 |
| CysB | 339-380 | 7.367 |
| Fur | 309-323 | 7.235 |
| MarA | 279-299 | 7.227 |
| TorR | 51-60 | 7.186 |
| ArgP | 70-82 | 7.031 |
| NorR | 257-273 | 6.744 |
| NagC | 353-375 | 6.624 |
| ArcA | 339-399 | 6.201 |
| GlpR | 176-195 | 6.188 |
| RcsB | 346-359 | 6.159 |
| Nac | 338-352 | 5.872 |
| CytR | 212-251 | 5.832 |
| PspF | 74-90 | 5.351 |
| UxuR | 244-261 | 5.097 |
| SoxS | 281-298 | 5.077 |
| XylR | 90-107 | 5.034 |
| ModE | 30-56 | 5.030 |