| TF name | Position | PWM scan score |
| FadR | 183-199 | 12.239 |
| RhaS | 90-106 | 9.967 |
| IHF | 71-83 | 9.202 |
| NarP | 11-17 | 8.982 |
| LacI | 152-172 | 8.841 |
| Fur | 53-67 | 8.513 |
| PhoB | 77-96 | 8.280 |
| RcsB | 56-69 | 8.183 |
| ArgP | 54-66 | 7.965 |
| Rob | 71-91 | 7.714 |
| CpxR | 353-367 | 7.697 |
| GntR | 39-58 | 7.510 |
| OxyR | 45-89 | 7.190 |
| ModE | 59-85 | 6.972 |
| TorR | 70-79 | 6.877 |
| H-NS | 85-99 | 6.804 |
| Fis | 78-98 | 6.745 |
| NarL | 55-61 | 6.718 |
| SoxS | 159-176 | 6.673 |
| TyrR | 296-317 | 6.507 |
| AraC | 218-235 | 6.184 |
| MelR | 323-340 | 6.051 |
| Lrp | 383-394 | 6.040 |
| UlaR | 125-144 | 6.035 |
| MetR | 363-386 | 5.929 |
| NorR | 61-77 | 5.801 |
| Nac | 51-65 | 5.789 |
| FNR | 68-89 | 5.609 |
| GcvA | 167-195 | 5.407 |
| Ada | 170-197 | 5.132 |
| CueR | 143-161 | 5.105 |
| CRP | 41-62 | 5.097 |