| TF name | Position | PWM scan score |
| MetJ | 158-165 | 11.690 |
| CRP | 356-377 | 11.128 |
| UxuR | 345-362 | 10.221 |
| Nac | 330-344 | 9.690 |
| UlaR | 336-355 | 8.827 |
| PhoP | 310-326 | 8.646 |
| NarL | 339-345 | 8.326 |
| MalT | 166-175 | 8.246 |
| OmpR | 311-330 | 8.193 |
| ArcA | 311-371 | 8.138 |
| XylR | 103-120 | 7.784 |
| IHF | 193-205 | 7.726 |
| FadR | 36-52 | 7.717 |
| H-NS | 176-190 | 7.553 |
| Ada | 299-326 | 7.172 |
| RcsB | 329-342 | 7.126 |
| IdnR | 322-337 | 7.123 |
| MetR | 319-342 | 7.004 |
| SoxS | 179-196 | 6.729 |
| Rob | 92-112 | 6.442 |
| GcvA | 319-347 | 6.263 |
| NagC | 167-189 | 6.222 |
| Fur | 101-115 | 6.198 |
| MarA | 177-197 | 6.178 |
| FNR | 302-323 | 6.118 |
| PhoB | 328-347 | 6.064 |
| PurR | 3-18 | 6.060 |
| DeoR | 270-285 | 5.876 |
| AraC | 106-123 | 5.826 |
| PspF | 344-360 | 5.817 |
| TorR | 331-340 | 5.646 |
| Fis | 377-397 | 5.529 |
| MelR | 340-357 | 5.424 |
| TyrR | 15-36 | 5.375 |
| AgaR | 338-361 | 5.367 |
| Lrp | 342-353 | 5.098 |