| TF name | Position | PWM scan score |
| PurR | 350-365 | 14.998 |
| Fis | 142-162 | 11.745 |
| FNR | 136-157 | 11.541 |
| ArgP | 115-127 | 11.088 |
| IHF | 29-41 | 9.965 |
| MalT | 127-136 | 9.469 |
| GalR | 350-365 | 9.287 |
| GalS | 350-365 | 9.287 |
| Rob | 136-156 | 9.105 |
| AraC | 160-177 | 8.932 |
| NarP | 123-129 | 8.841 |
| MarA | 83-103 | 8.574 |
| CpxR | 378-392 | 8.472 |
| PhoB | 231-250 | 8.438 |
| H-NS | 141-155 | 8.221 |
| SoxS | 193-210 | 8.153 |
| OmpR | 379-398 | 7.795 |
| NarL | 182-188 | 7.740 |
| MetJ | 329-336 | 7.644 |
| GlpR | 243-262 | 7.416 |
| Lrp | 362-373 | 7.393 |
| Fur | 92-106 | 7.373 |
| TorR | 135-144 | 6.764 |
| XylR | 211-228 | 6.718 |
| CueR | 227-245 | 6.623 |
| MetR | 14-37 | 6.460 |
| NorR | 135-151 | 6.334 |
| RcsB | 213-226 | 6.310 |
| UlaR | 24-43 | 6.294 |
| DeoR | 280-295 | 6.170 |
| ArgR | 91-106 | 6.132 |
| TrpR | 64-81 | 5.853 |
| Nac | 25-39 | 5.829 |
| CRP | 212-233 | 5.681 |
| NagC | 166-188 | 5.613 |
| ArcA | 53-113 | 5.560 |
| AgaR | 22-45 | 5.476 |
| ModE | 207-233 | 5.085 |
| TyrR | 102-123 | 5.072 |