| TF name | Position | PWM scan score |
| CRP | 370-391 | 10.740 |
| AraC | 167-184 | 10.197 |
| MalT | 46-55 | 10.001 |
| IHF | 299-311 | 9.960 |
| H-NS | 161-175 | 9.856 |
| FadR | 50-66 | 9.653 |
| TyrR | 212-233 | 9.495 |
| DeoR | 376-391 | 9.155 |
| NtrC | 180-196 | 9.100 |
| GntR | 2-21 | 9.100 |
| MetJ | 63-70 | 8.626 |
| Lrp | 192-203 | 8.519 |
| CueR | 175-193 | 8.406 |
| Nac | 30-44 | 8.366 |
| Fis | 185-205 | 7.980 |
| MarA | 373-393 | 7.925 |
| RcsB | 297-310 | 7.842 |
| GlpR | 374-393 | 7.776 |
| XylR | 207-224 | 7.483 |
| NarL | 124-130 | 7.336 |
| FruR | 261-278 | 7.089 |
| GadE | 378-397 | 7.058 |
| NagC | 8-30 | 6.997 |
| FNR | 209-230 | 6.832 |
| GalS | 374-389 | 6.804 |
| GalR | 374-389 | 6.804 |
| NarP | 167-173 | 6.654 |
| MelR | 340-357 | 6.362 |
| SoxS | 237-254 | 5.911 |
| Fur | 164-178 | 5.802 |
| PhoB | 100-119 | 5.795 |
| ArgP | 338-350 | 5.148 |
| Rob | 376-396 | 5.105 |
| Mlc | 305-327 | 5.100 |
| RhaS | 344-360 | 5.031 |