| TF name | Position | PWM scan score |
| MelR | 216-233 | 12.148 |
| ArgP | 242-254 | 11.630 |
| DcuR | 195-249 | 10.457 |
| IHF | 366-378 | 10.271 |
| MetJ | 273-280 | 10.100 |
| CpxR | 183-197 | 10.096 |
| ArgR | 382-397 | 9.999 |
| PspF | 188-204 | 9.639 |
| TorR | 11-20 | 9.065 |
| GadE | 373-392 | 9.010 |
| NagC | 199-221 | 8.602 |
| CysB | 182-223 | 8.459 |
| PhoB | 334-353 | 8.304 |
| Lrp | 185-196 | 8.130 |
| AraC | 105-122 | 7.922 |
| DeoR | 183-198 | 7.859 |
| RcsB | 186-199 | 7.803 |
| Nac | 378-392 | 7.381 |
| NarP | 99-105 | 7.302 |
| DnaA | 56-64 | 7.194 |
| NorR | 56-72 | 7.141 |
| H-NS | 344-358 | 6.689 |
| AgaR | 364-387 | 6.479 |
| MalT | 61-70 | 6.444 |
| XylR | 368-385 | 6.414 |
| TyrR | 2-23 | 6.218 |
| NtrC | 135-151 | 6.200 |
| FadR | 321-337 | 5.682 |
| NarL | 245-251 | 5.634 |
| PurR | 173-188 | 5.327 |
| Fis | 376-396 | 5.141 |
| GalR | 213-228 | 5.083 |
| GalS | 213-228 | 5.083 |
| ArcA | 216-276 | 5.027 |